PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0047s0272.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 311aa    MW: 34827.7 Da    PI: 6.5571
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0047s0272.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.83.8e-1884137356
                          --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          k+++++ eq+++Le+ Fe+ +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  Kaladp0047s0272.1.p  84 KKRRLNIEQVKTLEKTFEQGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 137
                          4557899**********************************************9 PP
2HD-ZIP_I/II129.51.4e-4183173191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          ekkrrl+ eqvk+LE++Fe+ +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++da+k+ene+L +++++L++e
  Kaladp0047s0272.1.p  83 EKKRRLNIEQVKTLEKTFEQGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYNILKRHFDAVKAENESLIAQNQKLHSE 172
                          69**************************************************************************************98 PP

          HD-ZIP_I/II  91 l 91 
                          +
  Kaladp0047s0272.1.p 173 I 173
                          7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MGSNGMPFFS SNFLLQTEDD DHHHQPPTSL NPLLPSCSPQ DFHGLASLLG KRGMSFSGID  60
HICEEVMNGE EDLSDDGLSH GGEKKRRLNI EQVKTLEKTF EQGNKLEPER KMQLARALGL  120
QPRQIAIWFQ NRRARWKTKQ LEKDYNILKR HFDAVKAENE SLIAQNQKLH SEILSLRSNN  180
RSDHPESINL NKETIIDQGS CSTRSDNSSD IHLDISRTPP AIDSPPHIRP ISIPLFPTSS  240
NHHASPAAAT TTAAAQLFFS PPITGLRTDS HNTGNNSHHV KEESSFTNMF CGMEDQSGGL  300
WPWLEQQHFN *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132140RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-107HD-ZIP family protein