PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0068.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 246aa MW: 27888.8 Da PI: 8.1226

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0068.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100.1	8.3e-32	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifss+gklye++s Kaladp0048s0068.1.p 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS 59 79***********************************************96 PP
2	K-box	92.3	8.4e-31	89	173	16	100
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +qe+ kLk ++e Lq+ qR+llGedL +L+ keL+qLe+qLe slk+iRs+K++++l q+ +lq ke++l e+nkaL++klee Kaladp0048s0068.1.p 89 NNYQEYLKLKGRVEALQKIQRNLLGEDLAPLNTKELEQLEHQLEISLKQIRSTKTQFMLHQLADLQLKEQNLLETNKALKQKLEE 173 679*******************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFCSS 60 PSMIKTLERY QQCSFSALDA CRPPCDSPNN YQEYLKLKGR VEALQKIQRN LLGEDLAPLN 120 TKELEQLEHQ LEISLKQIRS TKTQFMLHQL ADLQLKEQNL LETNKALKQK LEEGQERIPF 180 AQPWDDGSGH TIPYIHLATH SEASFYQPTG ITNNPTVQLG YSHAGGGDEG SQPQSMNCFM 240 PGWFL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-97	MIKC_MADS family protein