PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0209.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 337aa    MW: 37471.9 Da    PI: 6.6262
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0209.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.41e-10140948
                         HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         d++lvd ++  G g+W++ ++  g++R++k+c++rw +yl
  Kaladp0048s0209.1.p  1 DKKLVDHIETNGQGSWRALPKLAGLNRCGKSCRLRWTNYL 40
                         79************************************97 PP
2Myb_DNA-binding54.42.9e-174691148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg++++eE++ +++++  lG++ W++I+++++ gRt++++k++w+++l
  Kaladp0048s0209.1.p 46 RGKFSEEEEQAIINLHSVLGNK-WSAISSHLP-GRTDNEIKNFWNTHL 91
                         89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
DKKLVDHIET NGQGSWRALP KLAGLNRCGK SCRLRWTNYL RPDIKRGKFS EEEEQAIINL  60
HSVLGNKWSA ISSHLPGRTD NEIKNFWNTH LKKKLLQLGI DPITHRPRTD HLNLLANLPQ  120
LLAAANLTHL ISNSANPWDN AMRLQQHLSS DPRQHLAKVQ LMSNLLQALN SAANPPLNLD  180
IMMSSLFKKQ GSFQDQRVLE SLTRMNNSGQ MEASHEFGNG GQIGHFSAGF CNPMQLDDFT  240
TLESCEPFLN SNSSQFGGSY CAPFSDHSSE IPALVSATST ERGISTINET TNNSKYHPSA  300
EASNPTSMTS TTFEAWGDHQ MVDDEASESY WKDIIE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.24e-77MYB family protein