PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0224.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 352aa MW: 39015.6 Da PI: 6.2264

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0224.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	6	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd ++ G g+W++ ++ g++R++k+c++rw +yl Kaladp0048s0224.1.p 6 KGPWTPEEDKKLVDHIETNGHGSWRALPKLAGLNRCGKSCRLRWTNYL 53 79********************************************97 PP
2	Myb_DNA-binding	55.7	1.1e-17	59	104	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W+tI+++++ gRt++++k++w+++l Kaladp0048s0224.1.p 59 RGKFSEEEEQAIINLHSVLGNK-WSTISSHLP-GRTDNEIKNFWNTHL 104 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MHGLKKGPWT PEEDKKLVDH IETNGHGSWR ALPKLAGLNR CGKSCRLRWT NYLRPDIKRG 60 KFSEEEEQAI INLHSVLGNK WSTISSHLPG RTDNEIKNFW NTHLKKKLLQ MGIDPITHRP 120 RTDHLNLLAN LPQLLAAANL THLISNSANP WDNAMRLQQH LSSADHQQHL AKVQLMSNLL 180 QALNSAANPP LNLDLMMSSL FGKQGSFQDQ RVLESLIRMN NSGQMEASDD EIGNGGQIGH 240 FSAGLCNPMQ LDDFTTLGSC EPFLNSNSSQ FGGSYCAPFG DYISEIPALV SATSPERGIS 300 SINENTDNSK YPSAEASNPT SMTSTTFEAW GDHHQMVDDE ASESYWKDII E*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MHGLKKGPWT PEEDKKLVDH IETNGHGSWR ALPKLAGLNR CGKSCRLRWT NYLRPDIKRG  60
KFSEEEEQAI INLHSVLGNK WSTISSHLPG RTDNEIKNFW NTHLKKKLLQ MGIDPITHRP  120
RTDHLNLLAN LPQLLAAANL THLISNSANP WDNAMRLQQH LSSADHQQHL AKVQLMSNLL  180
QALNSAANPP LNLDLMMSSL FGKQGSFQDQ RVLESLIRMN NSGQMEASDD EIGNGGQIGH  240
FSAGLCNPMQ LDDFTTLGSC EPFLNSNSSQ FGGSYCAPFG DYISEIPALV SATSPERGIS  300
SINENTDNSK YPSAEASNPT SMTSTTFEAW GDHHQMVDDE ASESYWKDII E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-87	MYB family protein