PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0342.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 86aa    MW: 9489.64 Da    PI: 8.6975
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0342.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.91.3e-091255344
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                         +WT+   +l+ +a + + ++   +W+ Ia+ +g g++++++k ++
  Kaladp0048s0342.1.p 12 SWTAKQNKLFEKALASYDKEtpdRWHNIAQAVG-GKSAEEVKRHY 55
                         7*****************99*************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MSSGSAYGYG SSWTAKQNKL FEKALASYDK ETPDRWHNIA QAVGGKSAEE VKRHYDLLVL  60
DLMHIESGHV PMPNYRNCGN GKSRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-35MYB_related family protein