PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0496.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 488aa    MW: 53607.9 Da    PI: 8.0268
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0496.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS223.78.8e-691064812374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                          ++lL  cA a+++g+++++q+lL  l+el s +gd+++Rla   ++AL +++  + +++++a +  +++        ++l  f+e+sP++
  Kaladp0048s0496.1.p 106 EQLLNPCAAAIAAGNAARVQHLLIVLRELGSATGDANHRLALLGLRALTHHICPTPNTTVSAYTFASAE---PRFFQKSLLKFYELSPWF 192
                          689**************************************************9555555555555544...5555566666******** PP

                 GRAS  92 kfshltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLak 167
                           f + +aN  Il+ ++++    + +Hi+D+++s+G+QWp+Ll+aL+++p ++pp +RiT++++++ +              ++    L +
  Kaladp0048s0496.1.p 193 IFPNTIANFSILQVLAEAknysRNLHILDIGVSHGVQWPTLLEALSKQPgGPPPLVRITVMAPATDEaeidqtpfaVGPPGHRFSASLLS 282
                          ************9988876666889************************55666********988778888766666666778888899* PP

                 GRAS 168 fAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                          fA++l++++++n +  + l++l+ + ++ ++ E+l+V+ +++lh+l    ++ ++ r++vLkl+++l+Pk v+++e++ad+ +++F ++ 
  Kaladp0048s0496.1.p 283 FAKTLNINLRINYIENHPLQNLDAQVIDGSELENLIVSAQFRLHSLS---HKAPDDRTRVLKLIRGLNPKAVILSENNADC-GGDFPTGQ 368
                          *************9999*****************************8...77777789***********************.789***** PP

                 GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s 346
                          ++ +e++++++ds++a +    + r   Er++++ e+  ++  +  +    +e +++W er++e+GF    l+e++++ a+ llrk++ +
  Kaladp0048s0496.1.p 369 ARRVEFMWKFLDSTSAAF----KGRECEERQVVEGEAGRALVSRRWM----NEGMGRWCERMREVGFAGEGLGEEVVDAARVLLRKYDgN 450
                          **************8776....4555555555555565556555555....8************************************99 PP

                 GRAS 347 dgyrveee...sgslvlgWkdrpLvsvSaWr 374
                          +++rv e+    g++ + Wk+ p+ ++S W+
  Kaladp0048s0496.1.p 451 WEMRVGEDdggGGCVGIWWKGLPVSFCSLWK 481
                          99****9955445666**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
MVYEEDQQMM MQTSSNSIYN TITTTTDSAF LDDVILPDFS PSQAFEPTRK RKSADDPAPK  60
PAQARKGDGR NRSLVAKKQT GGKKKPSRSH GSNSSCGNGK DGRWAEQLLN PCAAAIAAGN  120
AARVQHLLIV LRELGSATGD ANHRLALLGL RALTHHICPT PNTTVSAYTF ASAEPRFFQK  180
SLLKFYELSP WFIFPNTIAN FSILQVLAEA KNYSRNLHIL DIGVSHGVQW PTLLEALSKQ  240
PGGPPPLVRI TVMAPATDEA EIDQTPFAVG PPGHRFSASL LSFAKTLNIN LRINYIENHP  300
LQNLDAQVID GSELENLIVS AQFRLHSLSH KAPDDRTRVL KLIRGLNPKA VILSENNADC  360
GGDFPTGQAR RVEFMWKFLD STSAAFKGRE CEERQVVEGE AGRALVSRRW MNEGMGRWCE  420
RMREVGFAGE GLGEEVVDAA RVLLRKYDGN WEMRVGEDDG GGGCVGIWWK GLPVSFCSLW  480
KLAPVID*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14853TRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-137GRAS family protein