PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0527.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C3H

Protein Properties

Length: 493aa MW: 55704.3 Da PI: 9.2458

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0527.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	23.5	9.6e-08	470	492	3	26
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 + +C +fa+ G C++G++CkF+Hg Kaladp0048s0527.1.p 470 RQPCWYFAE-GRCRFGSNCKFSHG 492 67999**.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MAFAEHLGAD RRPDGVVDGE DGDTERDFTE EEDSDLSVSD DSVDDPTFNE LEETMSGLSK 60 LSVQKKKASS SSSSARGRRL ESELVEAVDM DVGDDELLEE VDRNSFEAVE GLIRGGKLEK 120 LKIEQCKVYL RKYGLRLTGN KETLIKRISE HIRILNGGGE REYPAYSFVL NCKGDACMGD 180 VVMFEQKVYA AYDLAARSGP PIGTRVIAGR IVKESYGAAK QQHTFTIEVL WSRGEKPLPP 240 LHPLLIKGRN LYKMKTLRQR WEDETLREQA LRDKHLRGAA ARTDREMRIR EKKMRRELRA 300 KRVPRTDKYD KDHAPPILPQ NNNKKHPLAA HDNQAMNQPD ATESRNIMGQ QRNQSAPQQK 360 SQVQYSGMDS THHPHNRSVR GRGPAHGGFE NENSRLHPGS FQNVHNQQNG TTEVMRRYHG 420 AARRPLAAHA HQPPLSSREN IECPARSFSP PAGPRFSQQV RGNHHQHPPR QPCWYFAEGR 480 CRFGSNCKFS HG*

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MAFAEHLGAD RRPDGVVDGE DGDTERDFTE EEDSDLSVSD DSVDDPTFNE LEETMSGLSK  60
LSVQKKKASS SSSSARGRRL ESELVEAVDM DVGDDELLEE VDRNSFEAVE GLIRGGKLEK  120
LKIEQCKVYL RKYGLRLTGN KETLIKRISE HIRILNGGGE REYPAYSFVL NCKGDACMGD  180
VVMFEQKVYA AYDLAARSGP PIGTRVIAGR IVKESYGAAK QQHTFTIEVL WSRGEKPLPP  240
LHPLLIKGRN LYKMKTLRQR WEDETLREQA LRDKHLRGAA ARTDREMRIR EKKMRRELRA  300
KRVPRTDKYD KDHAPPILPQ NNNKKHPLAA HDNQAMNQPD ATESRNIMGQ QRNQSAPQQK  360
SQVQYSGMDS THHPHNRSVR GRGPAHGGFE NENSRLHPGS FQNVHNQQNG TTEVMRRYHG  420
AARRPLAAHA HQPPLSSREN IECPARSFSP PAGPRFSQQV RGNHHQHPPR QPCWYFAEGR  480
CRFGSNCKFS HG*