PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0727.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 229aa MW: 25934.2 Da PI: 6.4322

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0727.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	5	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd ll+++++q+G g W++++ g++R++k+c++rw++yl Kaladp0048s0727.1.p 5 AWTEEEDHLLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP
2	Myb_DNA-binding	44.4	3.9e-14	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg + +E +l+++++ lG++ W++Ia++++ gRt++++k++w+ + Kaladp0048s0727.1.p 56 RGTFADDEVLLIIKLHSHLGNR-WSLIASRLP-GRTANDVKNYWNCH 100 7888999*************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MGGVAWTEEE DHLLKKCIEQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIRRGTFA 60 DDEVLLIIKL HSHLGNRWSL IASRLPGRTA NDVKNYWNCH LSKKLSKAHN NHETMSPVTT 120 ANKGGHFTAY QYQTLTSISA TSLIGPHEDQ PSLMHLEDTY GLELELVGSN GMYITCGRDE 180 ADGQNEVNKF ASELEFEGTK MTAGREISSM DNHIGDWDEV IFDMDLWG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	4e-55	MYB family protein