PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0748.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 205aa    MW: 23108.4 Da    PI: 8.9637
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0748.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY216.96.3e-67101716170
                YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 
                           +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhC++l svn+a a q + + ++l+++ + ++l +  + +++ +  +  ++s+ t+
  Kaladp0048s0748.1.p  10 CPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSVLSWQDLHQHHQFTQLPNYLNGGQDNRIDHLGSSSKITN 99 
                          68*********************************************9999999999998888888888888888888777777766666 PP

                YABBY  96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                          + +++     ++++     v+rPPek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl
  Kaladp0048s0748.1.p 100 KMTMR--VPVQKSIE-ERAVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 171
                          66644..44444444.4579*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MGSSCVEVVC PEQLCYIPCN FCNIVLAVSV PCSSLFDIVT VRCGHCSNLW SVNMAAAFQS  60
VLSWQDLHQH HQFTQLPNYL NGGQDNRIDH LGSSSKITNK MTMRVPVQKS IEERAVNRPP  120
EKKQRVPSAY NQFIKEEIQR IKANNPDITH REAFSTAAKN WAHFPHIHFG LMLETNNNNQ  180
PTRFDQQNNA GKRLMSKAAG LMKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.19e-81YABBY family protein