PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0748.13.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 180aa    MW: 20399.4 Da    PI: 10.5971
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0748.13.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY182.62.2e-56514722170
                 YABBY  22 lavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevp 110
                           + vsvP +slf +vtvrCGhC++l svn+a a q + + ++l+++   ++l +  + +++ +  +  ++s+ t++ +  +    ++++ 
  Kaladp0048s0748.13.p   5 IKVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSVLSWQDLHQH---HQLPNYLNGGQDNRIDHLGSSSKITNKMT--MRVPVQKSIE 88 
                           68**************************99998877777665433...34444444444444444444444444444..3334444444 PP

                 YABBY 111 rvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                               v+rPPek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl
  Kaladp0048s0748.13.p  89 -ERAVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 147
                           .3579*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVKLIKVSVP CSSLFDIVTV RCGHCSNLWS VNMAAAFQSV LSWQDLHQHH QLPNYLNGGQ  60
DNRIDHLGSS SKITNKMTMR VPVQKSIEER AVNRPPEKKQ RVPSAYNQFI KEEIQRIKAN  120
NPDITHREAF STAAKNWAHF PHIHFGLMLE TNNNNQPTRF DQNNAGKRLM SKAAGLMKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.13e-68YABBY family protein