PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0903.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 230aa    MW: 25210.6 Da    PI: 8.919
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0903.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09158205455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Kaladp0048s0903.1.p 158 SHSLAERARREKISKRMKILQDLVPGC----NKLIGKALVLDEIINYVQSLQ 205
                          8*************************9....666*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MELPLVNESS FTPANPASYS LEDFWPLGAG IGDHTRVLGL RLANSERRIG LGNRDGSAEE  60
STVTDQLISR NGGGGRKRRL ADESSKVADA SGAEQLKTSS TKRVKILEPK EEKRSMKDEV  120
DGASVTGAKH AEQNTNVSEP PKQDYIHVRA RRGQATDSHS LAERARREKI SKRMKILQDL  180
VPGCNKLIGK ALVLDEIINY VQSLQHQVEV TTVGLCVRVF YCLICLFLV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.17e-58bHLH family protein