PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0910.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 329aa    MW: 36736.4 Da    PI: 4.5645
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0910.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.61.2e-1984137356
                          --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          k++++t +ql+ Le+ Fe ++++  +++ +LAk lgL+ rqV +WFqNrRa++k
  Kaladp0048s0910.1.p  84 KKRRLTVDQLKFLERSFEADNKLEPDRKLQLAKDLGLQPRQVAIWFQNRRARWK 137
                          55689************************************************9 PP
2HD-ZIP_I/II1278.1e-4184174292
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          kkrrl+ +q+k+LE+sFe+++kLep+rK +la++Lglqprqva+WFqnrRAR+k+kq+E+dy++L+++++alk++ +rL++e+e+L+ ++
  Kaladp0048s0910.1.p  84 KKRRLTVDQLKFLERSFEADNKLEPDRKLQLAKDLGLQPRQVAIWFQNRRARWKAKQMERDYDVLQASFNALKADYDRLSQEKEDLKVQI 173
                          9**************************************************************************************887 PP

          HD-ZIP_I/II  92 k 92 
                          +
  Kaladp0048s0910.1.p 174 S 174
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MASGGRVYGG SNLPPIMLQP SAAPGCPPLD SFYLSGSPPP FLLGSTSMVS FEDVNGSGNS  60
KRSLFRSFDQ EEDEYDEYFN QSGKKRRLTV DQLKFLERSF EADNKLEPDR KLQLAKDLGL  120
QPRQVAIWFQ NRRARWKAKQ MERDYDVLQA SFNALKADYD RLSQEKEDLK VQISILSDEF  180
VQKHQGTNMA EAPQALPPEN PAAASISEES KQDENSTSPK NGNKGVLDSD STSTKKREGD  240
NMFDADSHYY ISGVHSPHLE HVDSSFILEP DSSDLSQDED DSLSRGFLPS TPYRLPKLEP  300
GDYSLASSST SRNFGFPVDD NAFWSWSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132140RRARWKAKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-40HD-ZIP family protein