PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0971.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 262aa    MW: 28889.6 Da    PI: 9.5191
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0971.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.62.7e-40641631100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrr+Ca++C++ pyf  ++p+kfa vhk+FGasnv+k+l ++pe +r d+++slvyeA++r+rdPvyG++g i++lqqq++++
  Kaladp0048s0971.1.p  64 PCAACKLLRRRCAQECPFFPYFSPHEPQKFASVHKVFGASNVSKMLMEVPEAHRADTANSLVYEANVRLRDPVYGCMGAISALQQQVQSM 153
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          +ae++++++e
  Kaladp0048s0971.1.p 154 QAEINAIRAE 163
                          *****99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MSRERDKSSQ FSDELEKRIK RSASVGATET ITSEYNSASD QMIVGRRQML GSPGRRTRLN  60
TITPCAACKL LRRRCAQECP FFPYFSPHEP QKFASVHKVF GASNVSKMLM EVPEAHRADT  120
ANSLVYEANV RLRDPVYGCM GAISALQQQV QSMQAEINAI RAEILNYKLR EEANGIVTTN  180
SYSNYMTSNF IPPSPPWANI TVASLTPRPP SSSVVAATSA SHLLTTTTSS SVSVYTNQSS  240
IRNVKMGYSN SIVNENVRYL D*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.17e-71LBD family protein