PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0049.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BBR-BPC
Protein Properties Length: 301aa    MW: 33837 Da    PI: 10.0564
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0049.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind3261.1e-9913001301
            GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.maflqrdkalaernkalverdnkllall 85 
                          mddd    rn+gyyep+  +k +l+lqlm s+aerd+k+    r+  l +  +++a++++   +++q ++  + ++ +  +  +  +++ 
  Kaladp0050s0049.1.p   1 MDDDDGF-RNWGYYEPS--FKGHLNLQLMPSVAERDTKPflpgRDPTLMINPNRGAYQHHPpHHHHQLNHHAHPHHTQEFDVSDSPMHMH 87 
                          6666443.9******99..************************88888666666777666544455666666666666677777778888 PP

            GAGA_bind  86 lvenslasalpvgvqvlsgtksidslqq..lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkse 172
                          +++++ +++  + +++l+g  s   + +   ++  ++ +++v  +++e   +  +e+ ++ +  +  +kkr  +  pk++k kk kk ++
  Kaladp0050s0049.1.p  88 YMRETWMHQRDKFMNILPGNPSFGIMPEppATQpLHMMEQPVM-PKTE--MVVRMEDPVPLK-AEGPTKKRPGGGAPKTPKIKKLKKGPS 173
                          8888878888888888888888877777322223223333332.2333..223333434433.3444555778999***********999 PP

            GAGA_bind 173 kskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSq 262
                           +k++ + +s  +r+k +kk++d+v+ngv++D+s++P+PvC+CtGa++qCY+WG+GGWqSaCCtt+iSvyPLP+stkrrgaRiagrKmS 
  Kaladp0050s0049.1.p 174 LPKENGNGSS--QRVKPPKKNVDVVINGVDMDISNIPIPVCTCTGASQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSL 261
                          9988887777..89**************************************************************************** PP

            GAGA_bind 263 gafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                          gafkk+LekLa+eGy++ +p+DLk+hWAkHGtnkfvtir
  Kaladp0050s0049.1.p 262 GAFKKVLEKLASEGYNFTHPIDLKSHWAKHGTNKFVTIR 300
                          **************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDDDDGFRNW GYYEPSFKGH LNLQLMPSVA ERDTKPFLPG RDPTLMINPN RGAYQHHPPH  60
HHHQLNHHAH PHHTQEFDVS DSPMHMHYMR ETWMHQRDKF MNILPGNPSF GIMPEPPATQ  120
PLHMMEQPVM PKTEMVVRME DPVPLKAEGP TKKRPGGGAP KTPKIKKLKK GPSLPKENGN  180
GSSQRVKPPK KNVDVVINGV DMDISNIPIP VCTCTGASQQ CYRWGCGGWQ SACCTTSISV  240
YPLPMSTKRR GARIAGRKMS LGAFKKVLEK LASEGYNFTH PIDLKSHWAK HGTNKFVTIR  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-101BBR-BPC family protein