PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0141.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 255aa    MW: 28498.5 Da    PI: 8.8025
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0141.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY184.27.1e-5761652160
                YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnve 87 
                          ++f+  +q+CyvqC+fC til+vsvP +sl+++vtv+CGhC sllsvn++kas    + la+  ++++ +++    +++++ ++ + n +
  Kaladp0050s0141.1.p   6 NIFDLQDQICYVQCGFCATILLVSVPCSSLSNTVTVKCGHCNSLLSVNMMKASfvplNFLASLTQIEQLVQQ----KEESSADESRANAT 91 
                          578999********************************************9995554455666654443333....33333333333333 PP

                YABBY  88 keesastsvssekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160
                          k++ ++ s s+    +++++++++    +++PPekrqr+Psayn fikeei+r+k ++P +sh+eafs+aakn 
  Kaladp0050s0141.1.p  92 KTTDQKLSPSTGPSsDTEDEDDTSINNAINKPPEKRQRAPSAYNHFIKEEIKRLKKEDPTMSHKEAFSTAAKNV 165
                          33333333333333033444444445679********************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSAFSNIFDL QDQICYVQCG FCATILLVSV PCSSLSNTVT VKCGHCNSLL SVNMMKASFV  60
PLNFLASLTQ IEQLVQQKEE SSADESRANA TKTTDQKLSP STGPSSDTED EDDTSINNAI  120
NKPPEKRQRA PSAYNHFIKE EIKRLKKEDP TMSHKEAFST AAKNVRFYKL EAQFSKVLLV  180
TQNQLKPSVT FFSGQTSLIC GTRGVKRAMI RQKGTCDGSK GLVSVEELDD ITSRRWLFKI  240
RFRFYVFQQF RICG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23420.12e-50YABBY family protein