PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0141.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 188aa    MW: 20836.3 Da    PI: 5.3091
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0141.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY202.51.7e-6261732168
                YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnve 87 
                          ++f+  +q+CyvqC+fC til+vsvP +sl+++vtv+CGhC sllsvn++kas    + la+  ++++ +++    +++++ ++ + n +
  Kaladp0050s0141.2.p   6 NIFDLQDQICYVQCGFCATILLVSVPCSSLSNTVTVKCGHCNSLLSVNMMKASfvplNFLASLTQIEQLVQQ----KEESSADESRANAT 91 
                          578999********************************************9995554455666654443333....33333333333333 PP

                YABBY  88 keesastsvssekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168
                          k++ ++ s s+    +++++++++    +++PPekrqr+Psayn fikeei+r+k ++P +sh+eafs+aaknWa fP++ +
  Kaladp0050s0141.2.p  92 KTTDQKLSPSTGPSsDTEDEDDTSINNAINKPPEKRQRAPSAYNHFIKEEIKRLKKEDPTMSHKEAFSTAAKNWANFPNMRH 173
                          33333333333333033444444445679*************************************************9864 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MSAFSNIFDL QDQICYVQCG FCATILLVSV PCSSLSNTVT VKCGHCNSLL SVNMMKASFV  60
PLNFLASLTQ IEQLVQQKEE SSADESRANA TKTTDQKLSP STGPSSDTED EDDTSINNAI  120
NKPPEKRQRA PSAYNHFIKE EIKRLKKEDP TMSHKEAFST AAKNWANFPN MRHKGSEESY  180
DQAERDM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23420.11e-56YABBY family protein