PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0050s0168.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 347aa MW: 39319.6 Da PI: 5.466

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0050s0168.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++ + g+ R++k+c++rw +yl Kaladp0050s0168.1.p 14 RGLWSPEEDEKLIRYITAHGYGCWSEVPDKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	55.4	1.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ +++ G++ W+ Ia++++ gRt++++k++w+++ Kaladp0050s0168.1.p 67 RGRFTQEEEKLIISLHEVVGNR-WAQIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGHHTCCNQQ KVKRGLWSPE EDEKLIRYIT AHGYGCWSEV PDKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TQEEEKLIIS LHEVVGNRWA QIASHLPGRT DNEIKNYWNS WIKKKIRKPS 120 RMQHNLSTTA FHGGYTFSTA PDMTTEQYPF HYELLNYNPN PNNPSPFENF VGTKPLPTLD 180 TDDHHQEVPS LHPSFFMFDT SSVISQDSTA TTTQLLHIPS SASNSDLAWC FVDHQAVAVG 240 GHVEMGLSTD INFMLPALVD DGDPHHLLEL TYNDQCLEKQ HDLQQQGYQS TNSNNNDELL 300 SWDESQQCPN FLFWDNAVDG SAEDEIAPFS SLVGTGTSPY PPSLLP*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGHHTCCNQQ KVKRGLWSPE EDEKLIRYIT AHGYGCWSEV PDKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF TQEEEKLIIS LHEVVGNRWA QIASHLPGRT DNEIKNYWNS WIKKKIRKPS  120
RMQHNLSTTA FHGGYTFSTA PDMTTEQYPF HYELLNYNPN PNNPSPFENF VGTKPLPTLD  180
TDDHHQEVPS LHPSFFMFDT SSVISQDSTA TTTQLLHIPS SASNSDLAWC FVDHQAVAVG  240
GHVEMGLSTD INFMLPALVD DGDPHHLLEL TYNDQCLEKQ HDLQQQGYQS TNSNNNDELL  300
SWDESQQCPN FLFWDNAVDG SAEDEIAPFS SLVGTGTSPY PPSLLP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	8e-83	MYB family protein