PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0204.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25374.9 Da    PI: 9.4792
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0204.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.87e-29959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien + rqvtfskRrng+lKKA+ELSvLC+aeva+i+fs++gkl+e+s+
  Kaladp0050s0204.1.p  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIVFSTRGKLFEFSN 59
                         79***********************************************95 PP
2K-box71.91.9e-24921751497
                K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                          +   + e++ ++++ie++ ++qR+l+Ged+esLs++eL + e+qLe+sl++iR+kKnell++qi++l++ eke+ een +Lrk+
  Kaladp0050s0204.1.p  92 NMDIRDEISDMERQIEKISSSQRKLKGEDVESLSINELIETEEQLEQSLSRIRAKKNELLRDQIQKLKQEEKEMLEENVRLRKE 175
                          556789****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCE AEVALIVFST RGKLFEFSNS  60
TSGMRKTIDR YEKKTKGNDT KGEGADKHAD PNMDIRDEIS DMERQIEKIS SSQRKLKGED  120
VESLSINELI ETEEQLEQSL SRIRAKKNEL LRDQIQKLKQ EEKEMLEENV RLRKEARIGS  180
GKPWQQKLLE QLPSPEKSDD CGVETELFIG LPEMRRSRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.14e-59MIKC_MADS family protein