PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0050s0212.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 213aa MW: 23914.4 Da PI: 9.4325

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0050s0212.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1.1e-24	133	177	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrC+RtDGKkWRC +++++ +k+CE+Hlhrgr+rsrk +++ Kaladp0050s0212.1.p 133 DPEPGRCKRTDGKKWRCAKEAMPEYKYCEKHLHRGRHRSRKLVDP 177 79***************************************9987 PP
2	QLQ	37.1	9.6e-14	67	101	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q q+L++Q+ +++y+ a+++vP Ll +i+k Kaladp0050s0212.1.p 67 FTFMQRQELEQQACIFRYIEAGAQVPYPLLYPIWK 101 9********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MVDSATQVSR LPDGAETGID LGLELGLGSN FEAEMRKYKE RVVVVLDDEE DDDDRRRKKR 60 VRVPMGFTFM QRQELEQQAC IFRYIEAGAQ VPYPLLYPIW KSVAGSADRC RLPFIPNLFA 120 GPVGLSWKQG RSDPEPGRCK RTDGKKWRCA KEAMPEYKYC EKHLHRGRHR SRKLVDPSSA 180 TGLPPPPPSQ TKAPHFPAPE RIGLSIALPS GQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	60	RRRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	3e-30	GRF family protein