PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0226.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 307aa    MW: 34447.9 Da    PI: 4.781
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0226.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.3e-161461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd++l+  +   G  +W+++++  g++R++k+c++rw +yl
  Kaladp0050s0226.1.p 14 KGPWTAEEDKKLIAFIITNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61
                         79********************************************97 PP
2Myb_DNA-binding52.31.3e-1671111547
                          -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           ++E++l +d++++lG++ W++Ia++++ gRt++++k++w+++
  Kaladp0050s0226.1.p  71 NQDEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111
                          589***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGRQPCCDKL GVKKGPWTAE EDKKLIAFII TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY  60
LRPDLKRGLL NQDEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKMG  120
IDPVTHEPLK PKEDTIISNE DTPASSPQES DALNPSIDIA QPAEAAAPVT DKQPNEKMIS  180
ETADAGKLLN SDVIIEDPLS LIDCLWDDQE ASQIPGFVIE EHSRRLVDGD VMMHHPHDDL  240
QQLPSDQAAG GGRFLMSDLE LPDWEESCAW LLDCQDLSIH DYGFGCFSND FELSSFNSLE  300
VDNKQF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22680.11e-89MYB family protein