PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0279.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TCP
Protein Properties Length: 333aa    MW: 37720.1 Da    PI: 9.2464
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0279.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP141.75.5e-441272633133
                  TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasns 85 
                          gk drhski+T++g RdRR+Rls+++a++fFdLqd LGfdk+sktieWL++++k aike +g++  s  ++       ++++ +      
  Kaladp0050s0279.1.p 127 GKNDRHSKICTAQGFRDRRMRLSVQIARKFFDLQDALGFDKASKTIEWLFNKSKNAIKEVMGSTYHSR-AMdgpqrsnNDKDGR------ 209
                          799************************************************************55554.332211111222222...... PP

                  TCP  86 ssg........kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                            +         +++s++ + +++++ ++  + +k+ r karararert ekmr++
  Kaladp0050s0279.1.p 210 --NklksvnkqCKSTSKKLKGNNNNQISQCPQHKKDVRDKARARARERTLEKMRLR 263
                          ..123345533334444444444444455677777999***************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MMFSSSNSNG DSDCFRPYNG SMSPSSFPLA SSSSPALLEE DQFFVDHLLF MSQGQQQFFL  60
GHESEPHQLA LVDHQDFVDG MTVAGEFEEE VTPAQESKKK NRVGSSNDKN KNDCRPAKRP  120
NKRIRIGKND RHSKICTAQG FRDRRMRLSV QIARKFFDLQ DALGFDKASK TIEWLFNKSK  180
NAIKEVMGST YHSRAMDGPQ RSNNDKDGRN KLKSVNKQCK STSKKLKGNN NNQISQCPQH  240
KKDVRDKARA RARERTLEKM RLRVIEDPNQ RPFAAAANPH KLTCSEHIGS CSPFEQVDEI  300
SGAQSQSVEE LIHADWDIDS ARFYTSYIFD TN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-28TCP family protein