PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0304.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 224aa    MW: 24223.5 Da    PI: 9.3772
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0304.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26094.71e-294105197
               DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85 
                          +C++C+vlr++C++dC l+p +     p++q +++ +++k++G++ ++++l+a+++++r ++++sl+yeA+ r+ dPvyGavg++++ ++
  Kaladp0050s0304.1.p   4 SCNGCRVLRKGCPDDCSLRPGLswittPEAQGNATVFLAKFYGRAGLMNFLNATSDHHRAEIFKSLLYEACGRIVDPVYGAVGLLWSNNW 93 
                          6***************************************************************************************** PP

               DUF260  86 qleqlkaelall 97 
                            +++++e++l 
  Kaladp0050s0304.1.p  94 SHCEAAVEAVLS 105
                          ******998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MKTSCNGCRV LRKGCPDDCS LRPGLSWITT PEAQGNATVF LAKFYGRAGL MNFLNATSDH  60
HRAEIFKSLL YEACGRIVDP VYGAVGLLWS NNWSHCEAAV EAVLSGGRIL PIQNPRDHAG  120
HPIAALNSFD IRHVARPAPH EPDVAPRFTI RTKRRSPRFP KKVVRANWTE LGGPSDGSGF  180
SVETVEGSVA NRVRPNQQQG SDDKSETGLE LSLNLGPGKL KAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.12e-58LBD family protein