PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0318.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 274aa    MW: 30365.4 Da    PI: 6.9277
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0318.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.61.9e-152269148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT eEd  l++++   G g+W+  a++ g++Rt+k+c++rw++yl
  Kaladp0050s0318.1.p 22 RGPWTVEEDTMLIHYISCNGDGRWNMLAKCAGLKRTGKSCRLRWLNYL 69
                         89********************************************97 PP
2Myb_DNA-binding51.22.9e-1675118146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg+ +++E++l++++++++G++ W++Ia++++ gRt++++k++w++
  Kaladp0050s0318.1.p  75 RGNLSPQEQLLILELHAKWGNR-WSKIAQHLP-GRTDNEIKNFWRT 118
                          7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MACKSSDGKG SMYEEDEAEL RRGPWTVEED TMLIHYISCN GDGRWNMLAK CAGLKRTGKS  60
CRLRWLNYLK PDVKRGNLSP QEQLLILELH AKWGNRWSKI AQHLPGRTDN EIKNFWRTRV  120
QKQALQLSLE TPDNQQIAAS AFSQSNSPAS SSAMSMSPRS NWHNTFGCNS VTPTLGESSS  180
SSLHHQTPTN PSNVAYGNNV CISSSSPFHH ENCYYVDNSQ AADAGGGFGS VDAGVTATSG  240
YVGRRNWVAD DEVENGMWNN TDELWQFRYS SSN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.18e-69MYB family protein