PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0052s0013.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Nin-like
Protein Properties Length: 240aa    MW: 27960.4 Da    PI: 10.2605
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0052s0013.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.83.3e-26124173352
               RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          ++++le+++kyF++pi+ AAk+++v+lTvLK++CR ++I+RWPhRkiksl
  Kaladp0052s0013.1.p 124 STLELEEIQKYFDMPITLAAKKMNVGLTVLKKRCRDLNIMRWPHRKIKSL 173
                          689*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MKREPLSPKL NSYPSNVAAP IADRYNADHH CMVFDPSTQY QTWKNGPKLE YDPHTSHDAH  60
FYLSEDEMTY LNQLFKTDPV EPLECTGRKL GNVSADGTMR RDMKEARKPQ AGTRKRVSRF  120
TKSSTLELEE IQKYFDMPIT LAAKKMNVGL TVLKKRCRDL NIMRWPHRKI KSLKSLISNV  180
KELGLEKEIQ MLEEHRMTVE KMPHVELTEK TKKLRQACFK ANYKKRRQVQ ASRCFSLIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.11e-44Nin-like family protein