PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0052s0024.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 886aa MW: 97945.3 Da PI: 6.871

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0052s0024.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93	2.1e-29	576	627	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l+++Fs+++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ Kaladp0052s0024.1.p 576 AEKSISLQVLQQHFSGSLKDAARSLGVCPTTLKRICRQHGIERWPSRKIKKV 627 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MEDVDFSPGA MFGAPFATDT DFDFMDELLE GCWLETAEGS DFLQQSPSMG SSSTHPNPQL 60 PWPSHTYLGE FPQFQMQKND QKEENCKLRF SYERNSNQAD RHGAISPHSA EQEASIIPGC 120 SSQTASRIMN SGGEANNGRW WTAPSTPALS VMERLIRAIA CIKESKKDRD LLIQLWVPMD 180 RDGRRVLTTD NQPYVLDSKS TSLANYRNIS VTYQFSADHD SKVTEGIPSR VFLGKVPEWT 240 PDVRLYRSEE YARVDYAQRF DVRGTLVLPI FDQGSRTCLG VIEVVTTKQK IKYQHELESV 300 CSALEAFDLS SVKVQNPPLK TCSQSYQSVL PEIREVLKSA CSAHGLPLAL TWIPCLQQGK 360 AGCRHSDDNY IHCVSTVDSA CYIADANARG FLEACSEHHL LKGQGVAGKA FTTNQPCFCS 420 DITSFTKTEY PLAHHARMFG LHAAVAIRLR SIHCNVTDFV LQFFLPKNCT DGQDQMKMLN 480 SLSSIIQQAS RSLRVLTDEE LKAENASAVG DSANYADMDH GNKVAPIIQK EEPRELVTET 540 MPRQYMAGST VHDDYKMSDR SFRSVGKKGD KRRTKAEKSI SLQVLQQHFS GSLKDAARSL 600 GVCPTTLKRI CRQHGIERWP SRKIKKVGHS LEKLQRVIDS VQETSGSFKI GSVYSNFPEL 660 VSGSESGPKP LLDSKSSNEA KSPSPQPECD IVSPFTALKG KPKSQSASCS HSSSSSHSSS 720 SATPQCPATL KSVGGKETSR VRSETEVQVA SQQPAPAPKS QSLKSLGANI KQAAPVPQAP 780 VHQEADGRRV KVTYGEENIR FRMQAGWGFK DLIREILYRF SVEDMSDMQL KYLDDDSEMV 840 LLTCDADWEE CLDVCQVSEG QTIKLHLFAT AAHQIGSSFG STSFL*

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MEDVDFSPGA MFGAPFATDT DFDFMDELLE GCWLETAEGS DFLQQSPSMG SSSTHPNPQL  60
PWPSHTYLGE FPQFQMQKND QKEENCKLRF SYERNSNQAD RHGAISPHSA EQEASIIPGC  120
SSQTASRIMN SGGEANNGRW WTAPSTPALS VMERLIRAIA CIKESKKDRD LLIQLWVPMD  180
RDGRRVLTTD NQPYVLDSKS TSLANYRNIS VTYQFSADHD SKVTEGIPSR VFLGKVPEWT  240
PDVRLYRSEE YARVDYAQRF DVRGTLVLPI FDQGSRTCLG VIEVVTTKQK IKYQHELESV  300
CSALEAFDLS SVKVQNPPLK TCSQSYQSVL PEIREVLKSA CSAHGLPLAL TWIPCLQQGK  360
AGCRHSDDNY IHCVSTVDSA CYIADANARG FLEACSEHHL LKGQGVAGKA FTTNQPCFCS  420
DITSFTKTEY PLAHHARMFG LHAAVAIRLR SIHCNVTDFV LQFFLPKNCT DGQDQMKMLN  480
SLSSIIQQAS RSLRVLTDEE LKAENASAVG DSANYADMDH GNKVAPIIQK EEPRELVTET  540
MPRQYMAGST VHDDYKMSDR SFRSVGKKGD KRRTKAEKSI SLQVLQQHFS GSLKDAARSL  600
GVCPTTLKRI CRQHGIERWP SRKIKKVGHS LEKLQRVIDS VQETSGSFKI GSVYSNFPEL  660
VSGSESGPKP LLDSKSSNEA KSPSPQPECD IVSPFTALKG KPKSQSASCS HSSSSSHSSS  720
SATPQCPATL KSVGGKETSR VRSETEVQVA SQQPAPAPKS QSLKSLGANI KQAAPVPQAP  780
VHQEADGRRV KVTYGEENIR FRMQAGWGFK DLIREILYRF SVEDMSDMQL KYLDDDSEMV  840
LLTCDADWEE CLDVCQVSEG QTIKLHLFAT AAHQIGSSFG STSFL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein