PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0038.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 190aa    MW: 20865.1 Da    PI: 9.6014
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0038.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.64.2e-33112168158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep++VNaKQy++Il+RRq+Rak+e+e+kl +ksrkpylheSRh hAlrR+Rg+gGrF
  Kaladp0053s0038.1.p 112 EEPVFVNAKQYHGILRRRQSRAKAESENKL-AKSRKPYLHESRHLHALRRARGCGGRF 168
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MTSTVHHSDH NDQTEGQQKQ SEHGIHAAAA GTGISHPDIT NIANVPFPTP SHLGVGHAQA  60
AYPFPDPYYR SIFTSHEAQP YPAQPYSPQP MVHMQLMGIQ QAGLPLPSDV VEEPVFVNAK  120
QYHGILRRRQ SRAKAESENK LAKSRKPYLH ESRHLHALRR ARGCGGRFLN AKKNENSQQN  180
ESTSGGSSH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-56NF-YA family protein