PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0038.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 183aa    MW: 20025.4 Da    PI: 10.1268
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0038.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.73.9e-33105161158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep++VNaKQy++Il+RRq+Rak+e+e+kl +ksrkpylheSRh hAlrR+Rg+gGrF
  Kaladp0053s0038.2.p 105 EEPVFVNAKQYHGILRRRQSRAKAESENKL-AKSRKPYLHESRHLHALRRARGCGGRF 161
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MTSTVHHSGQ QKQSEHGIHA AAAGTGISHP DITNIANVPF PTPSHLGVGH AQAAYPFPDP  60
YYRSIFTSHE AQPYPAQPYS PQPMVHMQLM GIQQAGLPLP SDVVEEPVFV NAKQYHGILR  120
RRQSRAKAES ENKLAKSRKP YLHESRHLHA LRRARGCGGR FLNAKKNENS QQNESTSGGS  180
SH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-56NF-YA family protein