PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0252.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 342aa    MW: 37293.8 Da    PI: 8.1679
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0252.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.53.8e-32172228158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF
  Kaladp0053s0252.2.p 172 QEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHQHAIRRARGTGGRF 228
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MGHGNMPTKP EKPSIDLHGN PSPAVYSEPW WCSAGYNQAP SVVATGNAGY QPSRNLESNT  60
VQSFSTGGPN EDEDGNDVSK KSQQDAGCQQ ERSPHRDGNN IMPGAPTSGA DNCITQHPQL  120
ELVGHTMACA PNPYQDPYYG GMMAAYGPQP LIYPHPLGPH HARMPLPLEV AQEPVYVNAK  180
QYHGILRRRQ SRAKAELEKK LIKVRKPYLH ESRHQHAIRR ARGTGGRFAK KTDAENGGPA  240
AAQSVSSSGS ELMPSDSAET WNSHRCRFED PKGSSQSQMH NEHHKQTNSD QNGGGYGNSS  300
AFRPTSYHSG SRNEENDCSS QQWGSIASNN QVTSQRRFAI Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.27e-65NF-YA family protein