PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0294.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 253aa    MW: 27877.5 Da    PI: 9.8014
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0294.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH443.9e-1461113155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r+r+hn+ Er+RR++iN+ ++ Lr+llP +  ++s+++s  +++ +  ++I +Lq
  Kaladp0053s0294.1.p  61 RKRNHNASERQRRKKINDLYSSLRSLLPAS--EQSGRMSIPTTVARILKFIPELQ 113
                          7999*************************5..5*****************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MLSVTSSSST SLFGWPSDEA VYGHRINQGF YDLEELAAAA HADHLGTPGG DQGGGEYGDL  60
RKRNHNASER QRRKKINDLY SSLRSLLPAS EQSGRMSIPT TVARILKFIP ELQGEVERLE  120
KKKQAMSKKI NKVRESVFSS SSSKLAGADQ KVRGTDEAKA SITRDKSNRS SVLTSKVGDR  180
EFVIQISTLQ VSVSEILLSL EEDGFQLINA SSSESFSGRV FLNLHLQKVG VIRKMECEGL  240
DEKLLSMLEK RR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16175RKRNHNASERQRRKK
26273KRNHNASERQRR
36373RNHNASERQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-39bHLH family protein