PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0462.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 285aa    MW: 32855 Da    PI: 6.5231
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0462.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.21.5e-53351621128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                          lppGfrFhPtd+elv++yLk+k++g ++el ++i+evd+yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgk
  Kaladp0053s0462.1.p  35 LPPGFRFHPTDQELVDYYLKRKIHGLEIEL-DIIPEVDLYKCEPWELAdKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGK 123
                          79****************************.99**************85335566888******************************** PP

                  NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          d++v+s +++ +g+kktLv+y+grap+g +t Wvmheyrl
  Kaladp0053s0462.1.p 124 DRRVIS-QSRPIGMKKTLVYYRGRAPQGIRTGWVMHEYRL 162
                          ******.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MMIKPSHRYI YTTDHTASRR GRKKKKKNIM SPVGLPPGFR FHPTDQELVD YYLKRKIHGL  60
EIELDIIPEV DLYKCEPWEL ADKSFLPSRD PEWYFFGPRD RKYPNGFRTN RATRAGYWKS  120
TGKDRRVISQ SRPIGMKKTL VYYRGRAPQG IRTGWVMHEY RLDENECEDS SGIQDTFALC  180
RVFKKSGEFD RQEQQGQCSL PTAAVMEGSN ILTAMINSEQ EMVMSPDMDM GMGVGSSSSY  240
SRVDEVEELE KDDSWMQFIT DDDPWFSSSS ATMGGEEITT FNHN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11927RRGRKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-115NAC family protein