PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0053s0540.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 409aa MW: 45433 Da PI: 4.6391

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0053s0540.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46	1.3e-14	59	118	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aak ++ a+ k++g Kaladp0053s0540.1.p 59 SVYRGVTRHRWTGRFEAHLWDkDTWNTmqiKKgRQVYLGAYDNEEAAAKTYDLAAIKYWG 118 78*****************777799997557***********************98 PP
2	AP2	48.7	1.9e-15	162	214	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+++GV ++ +grW+A+I +s +k+ +lg++ t eeAa+a+++a+ +++g+ Kaladp0053s0540.1.p 162 SKFRGVAKHHHNGRWEARIGRVSG---NKYLYLGTYSTQEEAAAAYDRAAIQYRGA 214 79**************999754...5***********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MKRKFAAAAA ASSSSSSSST TSTSSDSSSI TSVESNSKPP ITKKPRKAPA AKAPPARSSV 60 YRGVTRHRWT GRFEAHLWDK DTWNTMQIKK GRQVYLGAYD NEEAAAKTYD LAAIKYWGPE 120 TALNFPIEMY KKEIEEEMQK LSREEYLGTL RRRSSGFSRG VSKFRGVAKH HHNGRWEARI 180 GRVSGNKYLY LGTYSTQEEA AAAYDRAAIQ YRGANAVTNF DISNYADLLI KNDPAHEVDG 240 GNEERFTDEQ PQPLNLETDV ENKNGISVTD HQPKCEEAFD PYADAQDSCT MDQMLVEDHG 300 IMNEHDLSWD LNLDPNFDEL PISNLSDIGK SCELQCELPA LLDDYNGFED SLDFMFSSGI 360 EENMFDLGNV DKADGASATP ATMTTSTSFS SISCMSTFPL DSYDDYLV*

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MKRKFAAAAA ASSSSSSSST TSTSSDSSSI TSVESNSKPP ITKKPRKAPA AKAPPARSSV  60
YRGVTRHRWT GRFEAHLWDK DTWNTMQIKK GRQVYLGAYD NEEAAAKTYD LAAIKYWGPE  120
TALNFPIEMY KKEIEEEMQK LSREEYLGTL RRRSSGFSRG VSKFRGVAKH HHNGRWEARI  180
GRVSGNKYLY LGTYSTQEEA AAAYDRAAIQ YRGANAVTNF DISNYADLLI KNDPAHEVDG  240
GNEERFTDEQ PQPLNLETDV ENKNGISVTD HQPKCEEAFD PYADAQDSCT MDQMLVEDHG  300
IMNEHDLSWD LNLDPNFDEL PISNLSDIGK SCELQCELPA LLDDYNGFED SLDFMFSSGI  360
EENMFDLGNV DKADGASATP ATMTTSTSFS SISCMSTFPL DSYDDYLV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-77	AP2 family protein