PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0602.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 237aa    MW: 25971.8 Da    PI: 6.7922
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0602.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000116183123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C+ C + F++   L  H+++H
  Kaladp0053s0602.1.p 61 YTCTFCRREFRSAQALGGHMNVH 83
                         9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAPPDVARLP VPHLQSPLLA PPKYSWTQTG NNDEDEESWE VRAFAEDTAN GMGTTWPPRS  60
YTCTFCRREF RSAQALGGHM NVHRRDRARL HQTQNSLTKI NSPNPGATTS SSTSGGSTLL  120
IPTQEFLVNG GLCLLYQLRN ESPNPNDEPS TLLSISPYPA SSYKPSFIAT YPQATYPSSV  180
ARTHHSSTIS MPLTSLNRIY HKNSMTSEGE NSGQHNIGEL DLELRLGHGP MSYLDA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.13e-33C2H2 family protein