PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0681.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 89aa    MW: 10326 Da    PI: 11.3788
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0681.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding476.1e-151461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg W+++Ed +l d++   G  +W++I+++ g+ R +k+c++rw +yl
  Kaladp0053s0681.1.p 14 RGLWSPDEDRKLRDYIINNGHACWSSIPAKAGLQRNGKSCRLRWINYL 61
                         789*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MGHKPNHQKV KHRRGLWSPD EDRKLRDYII NNGHACWSSI PAKAGLQRNG KSCRLRWINY  60
LRPGLKRGAF TLEEREIVLT LHRMLGNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.11e-38MYB family protein