PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0088.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 212aa    MW: 22414.1 Da    PI: 4.8028
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0088.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.37.1e-171159149
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                         k+i+++ +r vtf+kRr+g++KK   L++L++  +a i+fs+ g+ y++
  Kaladp0055s0088.1.p 11 KPIDDTARRRVTFTKRRQGLFKKMDKLCTLTGCTAAAIVFSTAGRPYTF 59
                         68*********************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MGTGRKRIEI KPIDDTARRR VTFTKRRQGL FKKMDKLCTL TGCTAAAIVF STAGRPYTFG  60
DLSLLDAFTG SMISSGGEGG SSVSYSRQDD HGGCFYLGIG EVSEPDGFKG SGGDGGCSTS  120
YGSEVGGGND HGGVNLGFGE IEGVNGLDGL LEEMSSLLEM RRQVVERLNR HVEGFDDHLL  180
LTSPLSTVEV DLPPPPLMAA DVTHSDDAIF R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.12e-14M-type_MADS family protein