PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0201.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 516aa    MW: 57548.1 Da    PI: 4.9611
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0201.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS316.46.2e-971505013352
                 GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                          e Lle A+a++++d  ++q+l++ l+el+sp+gd+ q++aayf++AL +r+++s++++y+al + ++++ + +++ + +  f+evsP+ +
  Kaladp0055s0201.1.p 150 EILLETARAIAEKDSGRVQQLMWMLNELSSPYGDTEQKVAAYFLQALFSRMTDSGERCYRALLSASDKTCSFESTRKTVLKFQEVSPWTT 239
                          689**********************************************************97777765554444455555********* PP

                 GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
                          f+h+++N a+lea+ege ++Hi+Df+ ++++QWp+Ll+aLa+R+ +++p+lR+T+v+ ++ g   ++ ++e+  r++kfA+ +gvpf+fn
  Kaladp0055s0201.1.p 240 FGHVACNGALLEALEGEPKLHIVDFSNTYCTQWPTLLEALATRStDDTPHLRLTAVVISRDGagVQRVMKEIVGRMEKFARLMGVPFKFN 329
                          ********************************************899*********99777788999*********************** PP

                 GRAS 180 vlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyy 264
                          +++++ +l++l++++L++k++Eala+n+v +lh++     ++e++rd+v++++k+l+P++v++ve+ead++ +    +Fl++f ++l+++
  Kaladp0055s0201.1.p 330 LIHHNnDLSELNFSDLDIKEDEALAINCVNALHSIK----ASEDRRDHVISVFKRLNPRIVTIVEEEADLDIGlegfDFLKGFEDTLKWF 415
                          **66669****************************8....7777899********************99855555669************ PP

                 GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                           + f++l+ +++++s+er  +Er+  gr+i++++a    +++er+et+++W +r++  GF++v++s+++ +++++llr++  +g+++ 
  Kaladp0055s0201.1.p 416 RVYFEALDDSFSKTSNERLALERA-AGRAIMDLLAGPPGDSIERRETAARWAQRMHGGGFTQVSFSDEVSDDVRALLRRYR-EGWTMV 501
                          ************************.*******************************************************9.777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MDTLFRLVSL DQYHQQLHQV TTTTSVAPRP CLPADQSFNS SRTSSGSVRS SSEYAHHGPQ  60
RFEELNRGGD DEECLNFFMD EDDFSSSSSK HYNPYNTANP NPSLPTQTSY LQPSTATSGF  120
DHQQSTAGFS TGNVAGIDFT GSISGKWASE ILLETARAIA EKDSGRVQQL MWMLNELSSP  180
YGDTEQKVAA YFLQALFSRM TDSGERCYRA LLSASDKTCS FESTRKTVLK FQEVSPWTTF  240
GHVACNGALL EALEGEPKLH IVDFSNTYCT QWPTLLEALA TRSTDDTPHL RLTAVVISRD  300
GAGVQRVMKE IVGRMEKFAR LMGVPFKFNL IHHNNDLSEL NFSDLDIKED EALAINCVNA  360
LHSIKASEDR RDHVISVFKR LNPRIVTIVE EEADLDIGLE GFDFLKGFED TLKWFRVYFE  420
ALDDSFSKTS NERLALERAA GRAIMDLLAG PPGDSIERRE TAARWAQRMH GGGFTQVSFS  480
DEVSDDVRAL LRRYREGWTM VSGDGRSEIS PVSQN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-171GRAS family protein