PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0296.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 216aa    MW: 24392.3 Da    PI: 4.7484
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0296.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.6e-192072456
                         -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         + +f+++q++ Le+ Fe + ++   ++ +LA++lgL+ rqV +WFqN+Ra++k
  Kaladp0055s0296.1.p 20 KSRFSDKQVKLLEAIFEAETKIEPLKKMQLARELGLEPRQVAIWFQNKRARWK 72
                         578*************************************************9 PP
2HD-ZIP_I/II113.51.3e-3619110293
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                           k r+s++qvklLE  Fe+e+k+ep +K++lareLgl+prqva+WFqn+RAR+k+kqlEk+++aL+++yd+l+ + ++L++e+++L ++l
  Kaladp0055s0296.1.p  19 SKSRFSDKQVKLLEAIFEAETKIEPLKKMQLARELGLEPRQVAIWFQNKRARWKSKQLEKEFRALRARYDNLAFQFQSLKEEKQSLFAQL 108
                          699***********************************************************************************9999 PP

          HD-ZIP_I/II  92 ke 93 
                          ++
  Kaladp0055s0296.1.p 109 EN 110
                          75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSFENGDSGS PPRRRRGESK SRFSDKQVKL LEAIFEAETK IEPLKKMQLA RELGLEPRQV  60
AIWFQNKRAR WKSKQLEKEF RALRARYDNL AFQFQSLKEE KQSLFAQLEN MNLAMGKLGE  120
RGVSTRLSPG EESENGGANC EYVEVIHRPE MCVRPDGVGY GGSGMDYVAA QDYAGNMDEL  180
GDSSQASTDQ EWCGADVDAF ELPCGEALWW ECWNC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.19e-42HD-ZIP family protein