PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0346.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 323aa    MW: 35785.6 Da    PI: 4.85
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0346.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.21.8e-19141199259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +D ++W+K Gq   k+s++ rsY++C+++ +C ++k v++++e p+ +++tY+g H h+
  Kaladp0055s0346.1.p 141 EDVWAWKKNGQNFTKDSPYLRSYFKCSTSdECFARKVVQQTSEVPEKFIVTYTGLHVHP 199
                          8*************************9998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDNFKYDVHA QIGSSSGSSN FSPGESCPFS VSDPTSFFLN VETEIPFSYP ELDSIFDPQD  60
DDQFHVFPPP VMKPFTTPTP SSAITTTTAT TAVVAPSPRP KVKKSKARSL SFEEIYKRKL  120
KKKSSKKISS VHEVGDGKQI EDVWAWKKNG QNFTKDSPYL RSYFKCSTSD ECFARKVVQQ  180
TSEVPEKFIV TYTGLHVHPP PNTENPIRGC YKPLRAKRSM EGGGGSNNAS SSSSTMTNQT  240
YDNAALTPIS SDHYHSSANT TFSEMMMMFS SEGEVTEEAR DGEVEELGED LFLHDDVNGD  300
ASLGDDEFFE GIEELHKKFF CD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.15e-19WRKY family protein