PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0363.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 283aa    MW: 31903.7 Da    PI: 7.4696
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0363.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.92e-121461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg W+++Ed +l d++      +W++I+++ g+ R +k+c++rw +yl
  Kaladp0055s0363.1.p 14 RGLWSPDEDRKLRDYIINNDRASWSSIPAKAGLQRNGKSCRLRWINYL 61
                         788*****************99************************97 PP
2Myb_DNA-binding48.22.5e-1567111147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg +T eE e  + ++++lG++ W+ I+++++ gRt++++k++w++ 
  Kaladp0055s0363.1.p  67 RGTFTLEERETVLTLHRMLGNK-WAEISKHLP-GRTDNEIKNYWHSN 111
                          899*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGHKPNTLKV KHRRGLWSPD EDRKLRDYII NNDRASWSSI PAKAGLQRNG KSCRLRWINY  60
LRPGLKRGTF TLEERETVLT LHRMLGNKWA EISKHLPGRT DNEIKNYWHS NLKSRNSVKN  120
EVSQSPSAAR QISSSMSSIC LQSLKTANNG SSLMGTSSVG TTACQPDTPA TKFASETLTP  180
KLLFAEWFSP DRRQQEFPDF LGGYGEHPND CLNPITSFPD YLLEELSFEE GSFCSNFNAP  240
DGLNFPSPYE LQGLISGEEE FDSTQKIDYI NFSDIHECKS CL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.16e-51MYB family protein