PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0365.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 752aa    MW: 82337.9 Da    PI: 5.9103
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0365.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.48.1e-2164119156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          r+k +++t++q++eLe++++++++p++++r eL+++l+L++rqVk+WFqNrR+++k
  Kaladp0055s0365.1.p  64 RKKYHRHTPQQIQELEAFYKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMK 119
                          7999*************************************************999 PP
2START181.26e-572614842205
                          HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS
                START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....k 78 
                          la +a++el+k+a+++  +W++ss    e +n +e+l +f+++ +     +  +a+r++g+v  ++  lve+++d + qW   ++    +
  Kaladp0055s0365.1.p 261 LAVTAMDELMKMAAVNTSLWSSSSdgvkEVLNFEEYLATFPPTIGpkpnnFVLDASRDTGLVCLNSLALVETFMDLN-QWVSVFPslvaR 349
                          7899***********************999************999********************************.************ PP

                          EEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTC CS
                START  79 aetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksng 160
                          a+t+ vis+g      g+lqlm+aelq+lsplvp R + f+R+++++++g+w++vd S+d   + +   s++  +++lpSg++i+++++g
  Kaladp0055s0365.1.p 350 ASTTTVISPGldgswnGTLQLMQAELQVLSPLVPlRQVKFLRFCKKHEEGKWAVVDLSIDAVHEGSVaLSPFSLCRRLPSGCVIQEMPDG 439
                          ******************************************************************9*9********************* PP

                          EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                           skvtw+eh+ ++++++h l+r+l++sg+ +gak+w+a lqr+ce
  Kaladp0055s0365.1.p 440 FSKVTWIEHTQYDENVVHPLYRRLLGSGMGFGAKRWLASLQRHCE 484
                          ********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    
MQLTRMEGGG AEGGLIGAGE LVDQHLVPGV LDGFDESRSG SENLDAASGD DQSIMRGEGR  60
APKRKKYHRH TPQQIQELEA FYKECPHPDE KQRLELSRRL NLETRQVKFW FQNRRTQMKT  120
QIERHENMLL KKENDKLRFE QAAMKNALRN PLCTSCGGPV VSPELPFDEQ TLKSENARLR  180
DELTRICLLT EKFLGRPISS IASSLTQRST TSTLDFSLGN IGFQGLNSMD HALSSGLDMS  240
LLGSAVSLPE APVDKSFIVQ LAVTAMDELM KMAAVNTSLW SSSSDGVKEV LNFEEYLATF  300
PPTIGPKPNN FVLDASRDTG LVCLNSLALV ETFMDLNQWV SVFPSLVARA STTTVISPGL  360
DGSWNGTLQL MQAELQVLSP LVPLRQVKFL RFCKKHEEGK WAVVDLSIDA VHEGSVALSP  420
FSLCRRLPSG CVIQEMPDGF SKVTWIEHTQ YDENVVHPLY RRLLGSGMGF GAKRWLASLQ  480
RHCEGLAALM ASGEPVENPS GMTASGRKSM FKLARRMSDN FCSGVCASLM SKWERLYPGN  540
VGEESVQLMS RKTVDSPGEP SGIVLSATAS VWMPVARQRL FDFLRDKRYR SDWDILSNGG  600
PIQEVVRISK GPDPGNCVSL LRCDTASPSQ EMLILQETWT DAASSLIVYA PVDTPAIQSV  660
LGGGDSTYVA LLPSGFALYP DPDPAQTGNP AAGCLLTAGF QILVNELPTA KLTVDSVTTV  720
EHLIHCTIEK IHQALDCAAP ASRSQNPVPH E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein