PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0370.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 431aa    MW: 47151.4 Da    PI: 7.596
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0370.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.75.2e-10104128126
                          --S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                          +kt+lC+f+++ G C +G++C++ H+
  Kaladp0055s0370.1.p 104 KKTKLCNFWSQ-GNCTFGEKCRYLHS 128
                          59*********.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MDLDGGKRVF HRLGGGGSDA GDKQQKVCFH WRAGRCNRYP CPFLHRELPE PTAHSSNGGL  60
SSRRPHSFSD DSGGGFSGPR QKTHNFNSAS SWGRNNNRAA APLKKTKLCN FWSQGNCTFG  120
EKCRYLHSWS LGESFTFLTQ LDGHQKVVTA IAWPAGSDKL FTGSKDETVR IWDCQSGKCE  180
NVANLGGEIG CMISEGPWIF VGLPNFVKAL NTVTSADQTL PGPVGQVYAL VVGYDMLIAG  240
TQDGTILAWR FNTVTNCFEP AASLKGHSLA VVTLVVAANR LYSGSMDNTI RVWNLDSLQC  300
IQTLTEHTSV VMSVLCWEQF LISCSLDKTV KIWVATESGN LEVTYTHTEE HGILTLCGMT  360
DAEAKPVLLC SCNDNTVRFY DLPSFTDRGK IFSKEEIRTI QLGPVGLFFT GDGAGQVKIW  420
KWLDKPVTTA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51980.10.0C3H family protein