PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0055s0395.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 366aa MW: 43251.7 Da PI: 6.0428

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0055s0395.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.7	7.7e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatg 87 +ppGfrFhPtdeelv++yL+kkv+++++el +vik++d+yk+ePwdL++ ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg Kaladp0055s0395.1.p 7 VPPGFRFHPTDEELVDYYLRKKVNSRPIEL-DVIKDIDLYKIEPWDLQElcRLGTeDQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATG 95 69**************************.9***********954544442556*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +dk+++ k+el+g++ktLvfykgrap+g+k+dW+mheyrle Kaladp0055s0395.1.p 96 RDKAIYL-KQELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 ***.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MNTFSQVPPG FRFHPTDEEL VDYYLRKKVN SRPIELDVIK DIDLYKIEPW DLQELCRLGT 60 EDQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YLKQELIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLESDEN GSPQEEGWAV CRVFKKKMTT VRRMNEHESP CWFDDQVSYM 180 PNLDNSPNQT ISYQQRHPWY PCKTEADQHH HQPHHQYHPR MHYNQNPHDH FLHLPHLDAP 240 NKPNPNNMSF DNNAMMLGPF EDHHMQHLGS HEHGHSLYQY NNAHDQQTMA TTDWKMLDKY 300 VASQLSHEDL ISDENNNDDY SNAENEIFHL SGDHEGLHEE DDTIVSDPMQ HDLEHQSACP 360 IDLWK*

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MNTFSQVPPG FRFHPTDEEL VDYYLRKKVN SRPIELDVIK DIDLYKIEPW DLQELCRLGT  60
EDQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YLKQELIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLESDEN GSPQEEGWAV CRVFKKKMTT VRRMNEHESP CWFDDQVSYM  180
PNLDNSPNQT ISYQQRHPWY PCKTEADQHH HQPHHQYHPR MHYNQNPHDH FLHLPHLDAP  240
NKPNPNNMSF DNNAMMLGPF EDHHMQHLGS HEHGHSLYQY NNAHDQQTMA TTDWKMLDKY  300
VASQLSHEDL ISDENNNDDY SNAENEIFHL SGDHEGLHEE DDTIVSDPMQ HDLEHQSACP  360
IDLWK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-111	NAC family protein