PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0482.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 210aa    MW: 23084 Da    PI: 8.1556
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0482.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260144.72.8e-4581071100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGa+nv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql
  Kaladp0055s0482.2.p   8 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGAANVTKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQL 97 
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          + +l+ +k+e
  Kaladp0055s0482.2.p  98 QMDLSCAKSE 107
                          *****99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MASSSTSPCA ACKFLRRKCQ PECVFAPYFP PDQPQKFANV HKVFGAANVT KLLNELHPSQ  60
REDAVNSLAY EADMRLRDPV YGCVGVISLL QHQLRQLQMD LSCAKSELSK YQSLAGSIPT  120
LHGGIYHRDH HHYFPAQHHQ FFPRDLAPPQ MIRVDGQSGN PNGNNSSSLI EGGLLAMNNV  180
TASIGQLSQF QQSARAARGD DRRAELDPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.32e-75LBD family protein