PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0055s0561.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NF-YC

Protein Properties

Length: 261aa MW: 29137.8 Da PI: 6.5098

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0055s0561.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176.8	2.1e-55	79	181	2	101
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdi 88 l++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+t+tdi Kaladp0055s0561.4.p 79 LQNFWANQyqeIEQTTDFKNHNLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITSTDI 168 89***9999*************************************************************************** PP NF-YC 89 fdflvdivprdel 101 fdflvdivpr++l Kaladp0055s0561.4.p 169 FDFLVDIVPREDL 181 ********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEQQGHTQAP ATGVGGGSAQ MPYGVTSYQP NQILGSTPQG SARSPTQPGM PGSSAQVAQH 60 QLAYQHIHHQ QQQQLQQHLQ NFWANQYQEI EQTTDFKNHN LPLARIKKIM KADEDVRMIS 120 AEAPVIFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAITSTDIFD FLVDIVPRED 180 LKDEVFANMP RGGAIPATGM PDALPYYYMA PQHAPPVGAP GMIMGRPVMD QPIYGQQSRP 240 YMGQQMWPHN QPQQRPPEDS *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	151	157	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	1e-80	NF-YC family protein