PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0056s0039.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 177aa    MW: 20207.9 Da    PI: 4.6134
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0056s0039.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.54.1e-31113171159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYG+K+vk+s++pr+YY+C+ ++Cpvkk+ver++edp++v++tYeg H+h 
  Kaladp0056s0039.1.p 113 LDDGYKWRKYGKKMVKNSPNPRNYYKCSVEKCPVKKRVERDREDPRYVITTYEGVHTHM 171
                          59********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MDGNSGDYQY QSMYNSFGYL DFGEASHANF GNNDFLPDYL LDDWFNQSDE PAVTGVELGQ  60
RDPVYQMSEV NGVEGNYYAQ NEETDTRESG SSTGRAQGKD KVAFKTESEI ETLDDGYKWR  120
KYGKKMVKNS PNPRNYYKCS VEKCPVKKRV ERDREDPRYV ITTYEGVHTH MSPSGY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.14e-43WRKY family protein