PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0056s0118.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 383aa MW: 42369.9 Da PI: 8.3973

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0056s0118.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2.1e-05	217	236	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ Kaladp0056s0118.1.p 217 FACSICTKTFNRYNNMQMHM 236 78*****************9 PP
2	zf-C2H2	14	0.00015	301	323	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+ksF k + ++H +++ Kaladp0056s0118.1.p 301 FMCRKCSKSFAVKGDWRTHEKNC 323 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MRVIDHQGNS FYHVVEEAQS NGIMMSHSKQ SIISSLFQQS PPPTTFIEFK SPVPSATSSS 60 SASSSSNTQQ QPQMMAGPRF ADDHMRTSAL QCLPLLSKLM EDTSNNTPSS EAAIKDEQHE 120 EVDNCGGSFG IKRQGDDKVT VTLCIGLSTG SSTDYDLIKV YEDGVRSGAT NKMMGSSAVK 180 KRASCSLMDD CYTSSFNSES RFWIPTPAQI MVGPMQFACS ICTKTFNRYN NMQMHMWGHG 240 SEYRKGPDSL KGSQPAAMLR LPCYCCAPGC KNNINHPRAK PLKDFRTLQT HFKRKHGSKP 300 FMCRKCSKSF AVKGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIRSFGK GHSPYPPMEG 360 FELGDKECAM AGSSEEDEVS PT*

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MRVIDHQGNS FYHVVEEAQS NGIMMSHSKQ SIISSLFQQS PPPTTFIEFK SPVPSATSSS  60
SASSSSNTQQ QPQMMAGPRF ADDHMRTSAL QCLPLLSKLM EDTSNNTPSS EAAIKDEQHE  120
EVDNCGGSFG IKRQGDDKVT VTLCIGLSTG SSTDYDLIKV YEDGVRSGAT NKMMGSSAVK  180
KRASCSLMDD CYTSSFNSES RFWIPTPAQI MVGPMQFACS ICTKTFNRYN NMQMHMWGHG  240
SEYRKGPDSL KGSQPAAMLR LPCYCCAPGC KNNINHPRAK PLKDFRTLQT HFKRKHGSKP  300
FMCRKCSKSF AVKGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIRSFGK GHSPYPPMEG  360
FELGDKECAM AGSSEEDEVS PT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-114	C2H2 family protein