PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0056s0129.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 251aa    MW: 28117.4 Da    PI: 4.8145
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0056s0129.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.28.3e-4641341127
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                          l+pGfrF Pt+eelv++yL++k+e+++ +l++vi+e++iy++ePw+Lp+     +++++++w+fF++r++++a+g r+nr+t+sgyWkat
  Kaladp0056s0129.1.p   4 LAPGFRFFPTEEELVSFYLRNKLENQRPDLHRVIPELNIYELEPWQLPQhageLCRGDTEQWFFFAPRQHREAQGGRPNRTTASGYWKAT 93 
                          579***************************99****************645543344777****************************** PP

                  NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                          g+   v+s++++++g+k+t+vfy+g+ap+g+kt+W m+ey 
  Kaladp0056s0129.1.p  94 GTPGYVYSTDNRAIGVKRTMVFYTGKAPTGTKTKWKMNEYL 134
                          ****************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEELAPGFRF FPTEEELVSF YLRNKLENQR PDLHRVIPEL NIYELEPWQL PQHAGELCRG  60
DTEQWFFFAP RQHREAQGGR PNRTTASGYW KATGTPGYVY STDNRAIGVK RTMVFYTGKA  120
PTGTKTKWKM NEYLAIAQDD AAAAAAAACS ASVPKLRREY SVCRVYVISG NFRAFDRRPS  180
GVATSETLTG LPVENEPNLI PQNVHLVGET SRPGALAAGD DGRDNPDIDD LDMESLGQDP  240
EFSWEQIDWL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-83NAC family protein