PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0057s0074.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 171aa    MW: 19633.3 Da    PI: 9.6688
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0057s0074.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF37.14.1e-12848242
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                         +i+n+s r+ t+ kR + ++KK  EL +LC++ ++ +i+s+
  Kaladp0057s0074.1.p  8 FIQNHSARKATYKKRSTNLIKKLDELTTLCGVVACCVIYSP 48
                         79*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MARRPVRFIQ NHSARKATYK KRSTNLIKKL DELTTLCGVV ACCVIYSPGS DQPLVWPQSQ  60
EQVRRVLTDY RSQPQAVKTR STSTAVSLLQ QQIARQREKL EKQRKENREK EMTEVMFQGL  120
TGKNLPFMNL YDLNDLAWLI DEYLNKISFH RGEREEGDRD ESAGDDGAKA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.16e-36M-type_MADS family protein