PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0057s0080.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 147aa    MW: 15905 Da    PI: 8.1121
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0057s0080.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH33.38.4e-115779527
                         --SGGGGTS--TTTTT-SS-SSS CS
              zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                          C++f +tG+C yGd+Ck+ H++
  Kaladp0057s0080.1.p 57 VCNRFVKTGFCAYGDSCKYLHPK 79
                         5********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MPLGKYYCDY CDKEFQDTPY ARKRHLQGLQ HQRARSIWYN SFKDPSQLCA EGFGAGVCNR  60
FVKTGFCAYG DSCKYLHPKT DNFPGQVPHV IGAMPPPGAG SQVYGGGSFP GTAVGSSLGI  120
SWDNLPPSLK PPPEGGYPPL PFVDWG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.15e-28C3H family protein