PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0057s0080.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 105aa    MW: 11801.4 Da    PI: 7.984
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0057s0080.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH344.9e-115779527
                         --SGGGGTS--TTTTT-SS-SSS CS
              zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                          C++f +tG+C yGd+Ck+ H++
  Kaladp0057s0080.3.p 57 VCNRFVKTGFCAYGDSCKYLHPK 79
                         5********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MPLGKYYCDY CDKEFQDTPY ARKRHLQGLQ HQRARSIWYN SFKDPSQLCA EGFGAGVCNR  60
FVKTGFCAYG DSCKYLHPKT DNFPGQVPHA LDVGFAVCEF CGLS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.13e-28C3H family protein