PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0057s0093.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 289aa    MW: 31983.6 Da    PI: 9.8722
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0057s0093.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.64.9e-162263243
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                         +i n+s r+ t+ kR+ g++KK +ELS+LC+++++ +i+s+ 
  Kaladp0057s0093.1.p 22 FITNDSARKATYKKRKRGLIKKVNELSTLCGVDACAVIYSPY 63
                         89**************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MSASRITSSP STMTRQKVKL AFITNDSARK ATYKKRKRGL IKKVNELSTL CGVDACAVIY  60
SPYETQPEVW PPSAVGVQRV LAQFRRMPEM EQSKKMVNQE TFLRQRIVKT KEQLKKQLKD  120
NREKEVTEVM FQCLTGKGMA NLNMMDLNDL AWLIDQYMRE INNRCEKLKK SEVATGLQAS  180
GAGGAEDLVE EDTKPLILDH VSHPSMMNNS GVHHAAAGDG RQGSAWLPGG FVSNNNGASS  240
SSSSNKNNHL QLQVLPGIMA GTDMILAPPQ VNMGGMWPHQ NPNFYNNM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-67M-type_MADS family protein